https://mayalucia.dev/tags/visualization/ Recent content in Visualization on MayaLucIA Hugo -- 0.156.0 en-us Wed, 25 Feb 2026 12:00:00 +0100 https://mayalucia.dev/domains/bravli/visualization/ Wed, 25 Feb 2026 12:00:00 +0100 https://mayalucia.dev/domains/bravli/visualization/ <p>Where atlas, connectome, physiology, and simulation converge into an interactive exploration tool. The visualisation portal is the feedback loop that closes the scientific cycle: build a model, render it, inspect it, find the gaps, refine.</p> <h2 id="lesson-04--visualization">Lesson 04 &mdash; Visualization</h2> <p>3D rendering and interactive exploration with <code>navis</code> and <code>plotly</code>:</p> <ul> <li><strong>Neuron point clouds</strong> &mdash; scatter plots of cell body positions, coloured by type</li> <li><strong>Connection matrices</strong> &mdash; heatmaps of neuropil-to-neuropil connectivity</li> <li><strong>3D neuropil meshes</strong> &mdash; surface renderings of the 78 brain regions</li> <li><strong>Interactive HTML exports</strong> &mdash; explorable in any browser</li> </ul> <h2 id="lesson-12--the-digital-twin-portal">Lesson 12 &mdash; The Digital Twin Portal</h2> <p>The portal philosophy: a model&rsquo;s limitations are as informative as its successes. The portal exposes:</p>